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Validated Exons
Page 2 of 2
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Showing rows 31 - 53 (53 total)
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Symbol |
Name in Fig.4 |
Gene Name |
Synaptic Function |
Interaction Partners |
Exon |
Nova-2 wt/ko cortex |
Nova-1 wt/ko sc |
cx/sc |
brain/ non-brain |
ΔI |
Fold Change |
ΔI |
Chip |
Chip |
PCR |
PCR |
Chip |
PCR |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Epha5
|
ephrinA5R
|
Ephrin receptor A5
|
Cell-cell adhesion 15
|
EphrinA5
|
E4a
|
0.29
|
0.24
|
0.58
|
|
15.00 |
|
0.02
|
0.05
|
0.13
|
0.38
|
Epb4.1l3
|
4.1B
|
erythrocyte protein band 4.1-like 3 (4.1B)
|
Receptor localization 1
|
Spectrin a2 ; SynCam
|
E16
|
0.32
|
0.31
|
0.31
|
|
11.00 |
|
0.02
|
0.09
|
0.11
|
0.49
|
Epb4.1l2
|
4.1G
|
erythrocyte protein band 4.1-like 2 (4.1G)
|
Receptor localization 2
|
Spectrin a2
|
E12b
|
0.29
|
0.29
|
0.44
|
|
10.74 |
|
0.06
|
|
|
0.41
|
Epb4.1l2
|
4.1G
|
erythrocyte protein band 4.1-like 2 (4.1G)
|
Receptor localization 2
|
Spectrin a2
|
E12a
|
0.34
|
0.32
|
0.29
|
|
8.57 |
|
0.00
|
|
|
0.34
|
Epb4.1
|
4.1R
|
erythrocyte protein band 4.1 (4.1R)
|
Receptor localization 3
|
CASK ; Spectrin a2
|
E15
|
|
0.22
|
0.14
|
|
1.80 |
|
0.31
|
0.15
|
|
0.23
|
Epb4.1
|
4.1R
|
erythrocyte protein band 4.1 (4.1R)
|
Receptor localization 3
|
CASK ; Spectrin a2
|
E13
|
0.09
|
0.22
|
0.11
|
|
2.06 |
|
0.06
|
0.04
|
|
0.23
|
Efna5
|
ephrinA5
|
ephrin A5
|
Cell-cell adhesion 14
|
EphrinA5R
|
E3a
|
-0.23
|
|
|
|
3.00 |
|
|
0.03
|
|
|
Dnajb5
|
|
DnaJ (Hsp40) homolog, subfamily B, member 5
|
Chaperone 18
|
|
E1a
|
0.35
|
0.33
|
0.12
|
|
51.00 |
|
|
0.00
|
0.12
|
|
Clstn1
|
calsyntenin 1
|
calsyntenin 1
|
Signaling 7
|
|
E10
|
0.34
|
0.39
|
0.40
|
|
27.00 |
|
|
0.00
|
0.01
|
0.66
|
Clasp1
|
Clasp1
|
CLIP associating protein 1
|
Cytoskeleton binding 12
|
|
E9
|
0.37
|
0.34
|
0.44
|
|
7.00 |
|
|
0.03
|
0.20
|
0.62
|
Chl1
|
Chl1
|
close homolog of L1
|
Cell-cell adhesion 13
|
Ankyrin G
|
E24
|
0.28
|
0.33
|
0.36
|
|
13.00 |
|
0.03
|
|
0.23
|
|
Chl1
|
Chl1
|
close homolog of L1
|
Cell-cell adhesion 13
|
Ankyrin G
|
E7a
|
-0.57
|
|
|
|
127.00 |
|
|
0.02
|
|
|
Catna2
|
catenin a2
|
catenin alpha 2
|
Neurotransmiter release 11
|
Spectrin a2
|
E17a
|
-0.25
|
|
|
|
12.00 |
|
|
|
|
|
Cask
|
Cask
|
calcium/calmodulin-dependent serine protein kinase
|
Receptor localization 10
|
PMCA1 ; Cav2.2 ; 4.1R ; Syncam ; GluR6 ; Munc18
|
E19
|
|
0.27
|
0.36
|
|
9.00 |
|
0.01
|
|
|
0.86
|
Camk2g
|
CaMKIIg
|
calcium/calmodulin -dependent protein kinase II gamma
|
Neurotransmiter release 9
|
CASK ; NMDAR
|
E13a
|
0.28
|
0.30
|
0.28
|
|
3.20 |
|
|
|
|
0.59
|
Cacna1b
|
Cav2.2
|
calcium channel, voltage-dependent, N type, alpha 1B subunit (Cav2.2)
|
Signaling 8
|
CASK
|
E24a
|
0.59
|
0.51
|
0.46
|
|
9.00 |
|
|
0.04
|
|
|
Atp2b1
|
PMCA1
|
ATPase, Ca++ transporting, plasma membrane 1 (PMCA1)
|
Neurotransmiter release 27
|
CASK
|
E35
|
0.56
|
0.56
|
0.70
|
|
34.59 |
|
0.15
|
0.20
|
0.09
|
0.88
|
Atp2b1
|
PMCA1
|
ATPase, Ca++ transporting, plasma membrane 1 (PMCA1)
|
Neurotransmiter release 27
|
CASK
|
E34
|
0.61
|
0.61
|
0.47
|
|
23.82 |
|
|
0.18
|
0.15
|
0.95
|
Arhgap21
|
Arhgap21
|
Rho GTPase activating protein 21
|
|
|
E8
|
0.37
|
0.42
|
0.18
|
|
2.30 |
|
|
0.01
|
0.19
|
|
Aplp2
|
Aplp2
|
amyloid beta (A4) precursor-like protein 2
|
Cell-cell adhesion 6
|
JNK2
|
E12a
|
0.46
|
0.49
|
0.54
|
|
12.00 |
|
0.14
|
0.16
|
|
0.70
|
Ank3
|
ankyrin G
|
ankyrin 3, epithelial / ankyrin G
|
Receptor localization 5
|
Chl1 ; Spectrin a2 ; KCNQ2
|
E17
|
-0.36
|
|
|
|
47.00 |
|
0.00
|
|
0.04
|
|
Agrn
|
agrin
|
agrin
|
Receptor localization 4
|
|
E31b
|
0.20
|
0.27
|
0.24
|
|
3.40 |
|
0.01
|
|
|
0.14
|
Agrn
|
agrin
|
agrin
|
Receptor localization 4
|
|
E31a
|
0.40
|
0.45
|
0.24
|
|
8.00 |
|
|
|
|
0.29
|
|
Page 2 of 2
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Showing rows 31 - 53 (53 total)
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References
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Voltage-gated sodium channels and ankyrinG occupy a different postsynaptic domain from acetylcholine receptors from an early stage of neuromuscular junction maturation in rats. J Neurosci 23, 2102-11 (2003). Back to Table | 6. | Herms, J. et al. Cortical dysplasia resembling human type 2 lissencephaly in mice lacking all three APP family members. Embo J 23, 4106-15 (2004). Back to Table | 7. | Vogt, L. et al. Calsyntenin-1, a proteolytically processed postsynaptic membrane protein with a cytoplasmic calcium-binding domain. Mol Cell Neurosci 17, 151-66 (2001). Back to Table | 8. | Rongo, C. & Kaplan, J. M. CaMKII regulates the density of central glutamatergic synapses in vivo. Nature 402, 195-9 (1999). Back to Table | 9. | Butz, S., Okamoto, M. & Sudhof, T. C. A tripartite protein complex with the potential to couple synaptic vesicle exocytosis to cell adhesion in brain. Cell 94, 773-82 (1998). Back to Table | 10. | Abe, K., Chisaka, O., Van Roy, F. & Takeichi, M. Stability of dendritic spines and synaptic contacts is controlled by alpha N-catenin. Nat Neurosci 7, 357-63 (2004). Back to Table | 11. | Wang, Z. W., Saifee, O., Nonet, M. L. & Salkoff, L. SLO-1 potassium channels control quantal content of neurotransmitter release at the C. elegans neuromuscular junction. Neuron 32, 867-81 (2001). Back to Table | 12. | Lee, H. et al. The microtubule plus end tracking protein Orbit/MAST/CLASP acts downstream of the tyrosine kinase Abl in mediating axon guidance. Neuron 42, 913-26 (2004). Back to Table | 13. | Naus, S. et al. Ectodomain shedding of the neural recognition molecule CHL1 by the metalloprotease-disintegrin ADAM8 promotes neurite outgrowth and suppresses neuronal cell death. J Biol Chem 279, 16083-90 (2004). Back to Table | 14. | Himanen, J. P. et al. Repelling class discrimination: ephrin-A5 binds to and activates EphB2 receptor signaling. Nat Neurosci 7, 501-9 (2004). Back to Table | 15. | Wong, E. V., Kerner, J. A. & Jay, D. G. Convergent and divergent signaling mechanisms of growth cone collapse by ephrinA5 and slit2. J Neurobiol 59, 66-81 (2004). Back to Table | 16. | Kneussel, M. et al. Gephyrin-independent clustering of postsynaptic GABA(A) receptor subtypes. Mol Cell Neurosci 17, 973-82 (2001). Back to Table | 17. | Contractor, A., Swanson, G. & Heinemann, S. F. Kainate receptors are involved in short- and long-term plasticity at mossy fiber synapses in the hippocampus. Neuron 29, 209-16 (2001). Back to Table | 18. | Suzuki, T. et al. Presence of molecular chaperones, heat shock cognate (Hsc) 70 and heat shock proteins (Hsp) 40, in the postsynaptic structures of rat brain. Brain Res 816, 99-110 (1999). Back to Table | 19. | Martire, M. et al. M channels containing KCNQ2 subunits modulate norepinephrine, aspartate, and GABA release from hippocampal nerve terminals. J Neurosci 24, 592-7 (2004). Back to Table | 20. | Yang, T. et al. 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