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Validated Exons


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Symbol Name in Fig.4 Gene Name Synaptic Function Interaction Partners Exon Nova-2 wt/ko cortex Nova-1 wt/ko sc cx/sc brain/ non-brain
ΔI Fold Change ΔI
Chip Chip PCR PCR Chip PCR
<< sort
Tpm3 Tpm3 tropomyosin 3, gamma Cytoskeleton binding 33   E6a 0.24 0.31 0.43
7.00
   
- 0.18
0.53
Tpm3 Tpm3 tropomyosin 3, gamma Cytoskeleton binding 33   E6 -0.31
- 0.35
- 0.43
7.00
     
- 0.6
Tacc2   transforming, acidic coiled-coil containing protein
-
  E10 0.36 0.19 0.38
5.00
0.13 0.07 0.41 0.63
Stxbp2 Munc18 syntaxin binding protein 2 (Munc18) Neurotransmiter release 21 CASK E3 -0.14
- 0.16
- 0.22
2.80
0.00 0.06
- 0.25
- 0.74
Srr   serine racemase NMDA receptor regulation 29   E2 -0.37
- 0.25
- 0.49
15.00
- 0.08
0.00
- 0.56
- 0.41
Spna2 spectrin a2 spectrin alpha 2 Receptor localization 31 Ankyrin G ; Catenin a2 ; Spectrin 4.1R, 4.1G, 4.1B E4 0.36 0.35 0.46
12.00
0.06  
- 0.2
 
Skip Skip sphingosine kinase type 1-interacting protein
-
  E10 0.41 0.35 0.26
9.00
0.16 0.21
- 0.21
0.19
Rap1ga1 Rap1GAP Rap1, GTPase-activating protein 1 Signaling 28   E27 -0.44
- 0.47
- 0.33
5.00
- 0.03
  0.18  
Ptprf LAR protein tyrosine phosphatase receptor type F (LAR) Receptor localization 20   E19a 0.47 0.58 0.61
18.00
 
- 0.01
0.12 0.24
Plcb4 PLCb4 phospholipase C, beta 4 Signaling 26   E36a -0.25
- 0.31
- 0.64
22.00
- 0.03
- 0.07
0.02
- 0.73
Ntng1 netrin G1 netrin G1 Axon guidance 22   E5a
- 0.32
- 0.26
3.50
  0.04
- 0.05
 
Neo1 neogenin neogenin Axon guidance 36   E27  
- 0.69
34.00
 
- 0.24
0.02
- 0.53
Ncdn   neurochondrin
-
  E1 -0.31
- 0.29
- 0.26
17.00
- 0.06
- 0.04
- 0.18
- 0.25
Mapk9 JNK2 mitogen activated protein kinase 9 (JNK2) Signaling 23 APLP2 ; Nik E6a   0.42
6.28
  0.00
- 0.32
0.58
Map4k4 Nik/Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 / NCK interacting kinase (Nik) Signaling 23 JNK2 E22a -0.15
- 0.29
- 0.15
2.10
     
- 0.23
Lrp1b   low density lipoprotein-related protein 1B (deleted in tumors)
-
  E79 0.21 0.39 0.47
11.00
0.03 0.02 0.06  
Lrp12   low density lipoprotein-related protein 12 / suppression of tumorigenicity 7 (St7)
-
  E7 0.30 0.63
19.00
- 0.01
0.06 0.24 0.55
Kcnq2 KCNQ2 potassium voltage-gated channel, subfamily Q, member 2 Neurotransmiter release 19 Ankyrin G E13 0.26   0.18
2.70
 
- 0.02
0.59  
Kcnma1 Slo potassium large conductance calcium-activated channel M, alpha 1 (Slo, MaxiK, BK) Neurotransmiter release 30   E24a 0.34 0.36 0.40
6.00
  0.00
- 0.09
 
Igsf4a Syncam immunoglobulin superfamily, member 4A (SynCam) Cell-cell adhesion 32 CASK ; 4.1B E8 -0.36
- 0.38
- 0.23
7.00
- 0.03
- 0.15
- 0.05
- 0.48
Idh3b   isocitrate dehydrogenase 3 (NAD+) beta
-
  E12 0.46 0.27 0.53
15.00
- 0.02
- 0.06
0.05 0.00
Grin1 NMDA R1 ionotropic glutamate receptor NMDA1 (NR1) Neurotransmitter receptor 24 CaMKIIg E19 0.25 0.32
5.00
0.06 0.00 0.45 0.46
Grik2 GluR6 ionotropic glutamate receptor, kainate 2, beta 2 (GluR6) Neurotransmitter receptor 17 CASK E16a -0.13  
- 0.22
2.80
  0.06
- 0.25
- 0.74
Gpr45   G protein-coupled receptor 45
-
  E2 -0.30
- 0.33
- 0.74
50.00
0.01 0.08 0.00  
Gphn gephyrin gephyrin Receptor localization 16 GABAARg2 ; GlyRa2 E7a
- 0.45
- 0.69
59.00
- 0.04
- 0.07
- 0.03
- 0.73
Golga4   golgi autoantigen, golgin subfamily a 4 (golgin-245)
-
  E22a 0.25 0.23 0.08
5.00
0.05 0.02 0.03 0.15
Glra2 GlyRa2 glycine receptor, alpha 2 subunit Neurotransmitter receptor 35 Gephyrin      
       
Gabrg2 GABAARg2 gamma-aminobutyric acid (GABA-A) receptor gamma 2 subunit Neurotransmitter receptor 34 Gephyrin     0.10
4.29
  0.18
- 0.43
 
Falz   fetal Alzheimer antigen / nucleosome remodeling factor, large subunit (FAC1/BPTF/NURF301) Transcription 25   E4 0.22 0.22 0.13
5.00
0.14 0.11 0.04 0.16
Epim syntaxin 2 epimorphin (Syntaxin 2)
-
  E10 -0.18
- 0.11
- 0.26
7.00
- 0.01
- 0.08
0.20
- 0.22
Page 1 of 2 Showing rows 1 - 30 (53 total)
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